BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D03SP1|AL426674
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1418 0.0
>3x_Contig1619
Length = 7770
Score = 1418 bits (705), Expect = 0.0
Identities = 744/765 (97%), Gaps = 3/765 (0%)
Strand = Plus / Minus
Query: 1 agcttaatagtaaagtcccatcttgtcacgatggttgatgtcagtgcaagtctgattaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5911 agcttaatagtaaagtcccatcttgtcacgatggttgatgtcagtgcaagtctgattaga 5852
Query: 61 ttcgtaataggaaaattcactattggtaaggtagattatttgctacataattgaactatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5851 ttcgtaataggaaaattcactattggtaaggtagattatttgctacataattgaactatg 5792
Query: 121 ttcttatgagttcgactctcatattttccgttcatttttctatatttttatatataatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5791 ttcttatgagttcgactctcatattttccgttcatttttctatatttttatatataatta 5732
Query: 181 taggtgaatatatttcaaaggtagaaagaatgcttgtggcgcgttaaatctgagttcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5731 taggtgaatatatttcaaaggtagaaagaatgcttgtggcgcgttaaatctgagttcaat 5672
Query: 241 tctcagtattcaccctttgccccaaatgcgacatcctcatagggatgatgcatttggggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5671 tctcagtattcaccctttgccccaaatgcgacatcctcatagggatgatgcatttggggc 5612
Query: 301 ttatataaattaatatctacccgcggcaccccccgaa--gaggtgaccgcgggaaattac 358
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5611 ttatataaattaatatctacccgcggcaccccccgaagggaggtgaccgcgggaaattac 5552
Query: 359 ttaataaatattaggtaattttatactattatataaatntatratakcttgtatagttta 418
|||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 5551 ttaataaatattaggtaattttatactattatataaatatataataacttgtatagttta 5492
Query: 419 attggttaaaacattcgtctcataagcgaagtatataggktcaagtcccattataagtat 478
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5491 attggttaaaacattcgtctcataagcgaagtatataggttcaagtcccattataagtat 5432
Query: 479 taaaaatataatattataatavgavtataatatrkgtskkgcaattctttataaaaatta 538
||||||||||||||||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 5431 taaaaatataatattataataagaatataatatatttcttgcaattctttataaaaatta 5372
Query: 539 cgttacgaaagtgcgataataatatatmagabtatccgcmaataatacaatgtattattt 598
||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 5371 cgttacgaaagtg-gataataatatataagattatccgcaaataatacaatgtattattt 5313
Query: 599 gcggtamttyattaaataataaccccgcggvctcatcatcctactaaagtagaatgagag 658
|||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5312 gcggtaatttattaaataataaccccgcggactcatcatcctactaaagtagaatgagag 5253
Query: 659 ccgcgggaaattataaatagtttcccccccccccgcggtctcctacccggtatacaccgg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5252 ccgcgggaaattataaatagtttcccccccccccgcggtctcctacccggtatacaccgg 5193
Query: 719 tatacaccggtataggtgccgcggggaatataatatattatatat 763
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5192 tatacaccggtataggtgccgcggggaatataatatattatatat 5148
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6060
Number of Sequences: 1807
Number of extensions: 6060
Number of successful extensions: 192
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)